rs37362583 SNP Detail

Summary

• ID
  rs37362583
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:72323882 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATTGGGGGG AAACGACAGA
  GGAATGAAAA GAGAGTGAGA AAGAACGAAA TGGGAAGGAT ATTTTCTGTT CTGAAAATCC
  AATCCTTGGG GCCATAGCTC CCACCGTTAA TTAAAATTAC ATCTCCAGAG CATCTGTGTA
  GAGAAAGGCT GCAGGTCTGG GCCCTCGCAG TACCGATCTG CAACAGACAT CTGGCTGTCT
  R
  GGCTTCAGCA GCTGTGTGCA GAGGGCTAGG AAGTGGGGAA AGGCTTAGGT TAGCTGAAGG
  GAAGCCATCC AGGTCCCAGA TCCCTTCTTC TTCAGGGAGG GAGTCGAAAG GGAGGAGGGG
  GTGGGGCAGG AGAGGGCACA CAGTTGCAGT TATCCACAGA GCCTAAATAA TGAATGATTA
  AACAAAATGA TTTTAGGCCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ
ss51274562	NES14276912	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	A	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ
rs37362583					SNP	G	G	G	G	A	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51274562	NES14276912	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:72323882 () rs orientation: forward

Symbol	Name	Function Class
Cpgi355	CpG island 355	230 bp distal
Pecr	peroxisomal trans-2-enoyl-CoA reductase	409 bp upstream
Tmem169	transmembrane protein 169	within coordinates
Tssr114	transcription start site region 114	444 bp upstream
Tssr115	transcription start site region 115	430 bp upstream
Tssr116	transcription start site region 116	410 bp upstream
Tssr7298	transcription start site region 7298	304 bp downstream
Tssr12164	transcription start site region 12164	495 bp upstream
Tssr12165	transcription start site region 12165	457 bp upstream