rs37374597 SNP Detail

Summary

• ID
  rs37374597
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:70927797 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATAAATAATT CTTTAAAAAA
  TTCTTTTCTA TACCAAATCA ACCCTCCTCT GTCCCCCCCG CCCCGTCCCA TCAACCCCCA
  TCTTTCTCTC CCTTTCTCCC TCCCTCCCTA GACCCATCCT TGTTTCTCCC CCTCCTTCTA
  AAACATAGAT TAGTGCATTG GTACAAAGTA CTTTGTCAGT TTTTGCACAC CTGTCTTGTA
  S
  CCTGGCTCCT GCATCTTCCC ATGCGCATCT GTGGAGTTAT GCAGGCACAT AGCTATTGCT
  TATGGCTTTT CACCCAAGTT ATCTGAAAAC AATATCTTGA TTGATTCTGA TACCTTTCTC
  ACACATCCCC AGCTCGCAAA CAGTTGCTTA ATCATCTTTG TGTATAGTAG TGTCCCCCAT
  TACTTATACA ATAGATTATG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51673425	NES14828336	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	C	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37374597					SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51673425	NES14828336	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:70927797 () rs orientation: forward

Symbol	Name	Function Class
Gm66475	predicted gene, 66475	562 bp upstream
Gm66915	predicted gene, 66915	within coordinates
Tssr61339	transcription start site region 61339	481 bp downstream