rs37375546 SNP Detail

Summary

• ID
  rs37375546
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:58776699 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TATCT AAACAACTCA GTATTAACAA
  S
  TAAGTGTGAC TCTGTGGTGT GTGTG                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	PWD/PhJ	SM/J	WSB/EiJ
ss50903139	NES13491010	PERLEGEN	MM_PANEL2	f	SNP	G		G	G	C	G	G	G		C	C		G
ss146567762	ENSMUSSNP5749990	ENSEMBL	ENSEMBL_Sanger	f	SNP		G
ss325872821	CHEV_19_58862757	CHEVERUD	SCREENING_POP	f	SNP									G			G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	PWD/PhJ	SM/J	WSB/EiJ
rs37375546					SNP	G	G	G	G	C	G	G	G	G	C	C	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50903139	NES13491010	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:58776699 () rs orientation: forward

Symbol	Name	Function Class
Gm17150	predicted gene 17150	1928 bp upstream
Gm54579	predicted gene, 54579	1576 bp upstream
Rr550521	regulatory region 550521	480 bp proximal
Spmip5	sperm microtubule inner protein 5	within coordinates