rs37380168 SNP Detail

Summary

• ID
  rs37380168
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:44151719 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGTAGCTTG AACTGCTAGT
  CCTCCTGCTT CCACCTTCCC AATGCTGGGA TGACAGTCAT CCACCACTGT GGCCAGCTTA
  CAGAGTGCTG GGGATGGAGC CGAGGCTTTG TGCTAGACAA ACACTGTCTC CAGACCCACA
  GAAAGAGAAA GGGTCTCATG GCATCCAACA TTCCACATAG TTGAGGCTCT TGATATCTCA
  R
  GCACCTAAGA ACTATGGCTA CAGATGTGCT TTGACATGCC GGGCCTTTTG TTTTTAAAAT
  TGTTTCTAAT GTTTTAAATT TATTTATTTT ATGTTGAGTG CATTGTAGTT GTCTTTAGAC
  ACCCTAGAAG AGGGCATCAG ATTCCATTAA AGATGGCTGT GAGCCACCTT GTGGTTGCTG
  GGAATTGAAC TCAGGACCAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	BALB/cByJ	DBA/2J	MOLF/EiJ	PWD/PhJ
ss51891388	NES14911103	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	BALB/cByJ	DBA/2J	MOLF/EiJ	PWD/PhJ
rs37380168					SNP	A	A	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51891388	NES14911103	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:44151719 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18970	CpG island 18970	1845 bp distal
Garin5a	golgi associated RAB2 interactor 5A	809 bp downstream
Gm44646	predicted gene 44646	within coordinates
Mybpc2	myosin binding protein C, fast-type	within coordinates
Rr646111	regulatory region 646111	596 bp distal
Rr646112	regulatory region 646112	116 bp distal
Rr646113	regulatory region 646113	366 bp distal