rs37383309 SNP Detail

Summary

• ID
  rs37383309
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:131425509 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCCCCACCA TCATCTTCAC
  TCCCTCCTCT GGTTGAAAAC TCGTCATTTA TGTCACTTGA TGGGACACGA CATCTCCATG
  CTCAGATGGC TTTCTCAGCA CAGTTTCTGT TTTAAGGTTC CTAAGTGGTA CTTAGCTCAT
  AGTGTCTTTG TGTGAAGGTT TTCTCTTCTC CCCACCTGGA TCTCAGAGGA CAGCATTCCA
  Y
  ATTCAGACTT ACTGCCTCCC TTCTGCAGAC AGCCTCCGAA CTGTACCCCA GACTCTGTGA
  TTTCCAGCCT GCCACAGAGT CATTTTGTTC CATCTTACAA TCATGAACTG CCCATCCTCC
  ACACTGCCTG TCTCCTTCAC CAGCTTGTTT ACCAGGAGCT TAGGCAGATT TACATGAATC
  ACACCTTGTT ATGGTTGTGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss51932574	NES14951463	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	C	T	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs37383309					SNP	T	T	T	T	T	T	C	T	T	T	C	T	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51932574	NES14951463	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:131425509 () rs orientation: forward

Symbol	Name	Function Class
Gm34645	predicted gene, 34645	991 bp downstream
Gm44546	predicted gene 44546	233 bp upstream