rs37392192 SNP Detail

Summary

• ID
  rs37392192
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  126
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:24513148 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGTTAATATA GTTTTTAAGA ACACAGAATA TGCTTAAAAG
  GAAAAAAAAT TAAGCCAGTA GAACAGAAAG GGAGAAAATA AACAGTGAAA TAAACCTCTA
  Y
  TGTTAATACT CTAGTTTTAC TTCTTAGAGT CAAGCAATAT AATTTTACAA ATTGTTCCTT
  GATGAATTTA TAATTGGAAC CCTATATCCT AAAATATATA                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	WSB/EiJ
ss51254449	NES13801398	PERLEGEN	MM_PANEL2	f	SNP	T	T	C	T	T
SNP Consensus Information
SNP					Consensus Type	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	WSB/EiJ
rs37392192					SNP	T	T	C	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51254449	NES13801398	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:24513148 () rs orientation: forward

Symbol	Name	Function Class
Gm67852	predicted gene, 67852	1406 bp upstream
Iqub	IQ motif and ubiquitin domain containing	within coordinates
Rr627228	regulatory region 627228	1480 bp proximal
Rr627229	regulatory region 627229	1908 bp proximal
Rr627230	regulatory region 627230	1963 bp proximal
Tssr59986	transcription start site region 59986	1887 bp downstream