rs37397063 SNP Detail

Summary

• ID
  rs37397063
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  126
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:110231707 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGCACCCAAG TGCTACAGGC TATTTTGATG CTATGAAGAC
  ATAGGGAGTA AAATGAGATA ATTTTAACCT TTAGATTCTC AGGCCAGATG TCTCCACATG
  Y
  CTTCTAACTC TGAGGATGGC GTCAGTAGGT GATTTGCGCC CCACGGTGAT TCTGAGAGCT
  TTCCATGGGA GCTAGTAGGA TGGGGAAGGG GAACTGCTCT                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss50455935	NES14118494	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	C	C	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs37397063					SNP	T	T	T	T	T	T	T	T	C	C	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50455935	NES14118494	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:110231707 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19578	CpG island 19578	1697 bp distal
Gm28863	predicted gene 28863	1603 bp upstream
Rr400547	regulatory region 400547	1992 bp downstream
Rr653272	regulatory region 653272	1788 bp distal
Rr653274	regulatory region 653274	577 bp distal