rs37410833 SNP Detail

Summary

• ID
  rs37410833
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:22009780 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGGCACTAT TATTAGCCAA
  GACTCTCACT GTTTTCCTAA CTGCAGTCAG GTGCAAAGAA AAAAGGACAC CAAAATCTTC
  TATTTACCTA GAGCATAGTC TTTCACTCAG GAATCAAGTT ATTTCCTGTT TCAATTTTTT
  TTTTAAGTGC CTGTTTTTGT AAAATGGCCT TTCCATAAAT ATATCTTATC AGGGAATGCT
  S
  TAAGATTCTT CCAACATTAG AAATGAAACT GTTCTGGTTG ATGCCTCGAA GGCTTTTTGA
  GTGGGAAGAA CACAAAGCAA AAACCTTCAG AGAATTGAAC ACACTAAATA TGTTACTGAA
  GATTATTCTG GTTGTTGCTG GTATTTCATC CTTTTCTTCA GAGCTATAAA GTGCAAGGCA
  TTCACAATTT CCCACAGAGT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss51434218	NES14436546	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	G	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs37410833					SNP	C	C	C	C	C	C	G	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51434218	NES14436546	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:22009780 () rs orientation: forward

Symbol	Name	Function Class
Gm31813	predicted gene, 31813	within coordinates
Rr397621	regulatory region 397621	1711 bp downstream
Rr574172	regulatory region 574172	1807 bp distal
Rr574173	regulatory region 574173	57 bp proximal
Rr574174	regulatory region 574174	1575 bp proximal
Tssr28575	transcription start site region 28575	528 bp downstream