rs37417371 SNP Detail

Summary

• ID
  rs37417371
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:131912663 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTGGCTAGG GTGTCCAAGC
  CCTGAGCTAG GAGAATGTCT GCACTGTGGC CCTAAACATG CTGACCAGAA GTGCCGGCTA
  CCCTTCTTTG CATTGACTGA GATCATTCAT AAGCAGATAA TGTGCAGACA CGCTTTAAAA
  CCCACGTATC AAGGGTGCAG CCAAACACTG CAAGGATCCT CCCTCTAACC TCTCCTACTC
  R
  GTAATGCAGG TTGGATTATG TGCTGCCGGA GCCATGGGCC CAGTACCCGA AGGGAAGCGA
  GCACAGAAAA GCATGTCTTC CTCCTAGGTG GCCGTCACAC TATCTTTTTG ACCACAAAGA
  ACAAAACAGC CCAGCAGGCA CATATTCCAT TTCCAGAGAA AATGTGAAAC CATCGGCCCC
  AGAACACTGT AAGGAAAACA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss51931032	NES14953441	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	G	A	G	A	A	G	A	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs37417371					SNP	A	A	A	G	A	G	A	A	G	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51931032	NES14953441	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:131912663 () rs orientation: forward

Symbol	Name	Function Class
Chst15	carbohydrate sulfotransferase 15	within coordinates
Gm44891	predicted gene 44891	922 bp downstream
Gm71837	predicted gene, 71837	within coordinates
Tssr75193	transcription start site region 75193	677 bp downstream