rs37425314 SNP Detail

Summary

• ID
  rs37425314
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:19542125 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAATAATTTT ATAGTTCTAA
  TGTGTAATTC TGATTAAACA TATTGAGTAG AATTTACCAA ATAAAGCTGT CAGTAAATTT
  AAAGTAGCCT TAATGCCGCA TCTTCTTGTG CAGTGCCAGC CTCCTCCCGT AAACAAAATG
  GTGGAGGTCG GTGTGAACGA ATTTGGCTGT ATTGGACGCC TGGTTACCAG GGCTGCTGTC
  Y
  GCTCTCCACT TGGCAAAGTG AAGATTGTTG CCACCAGTGA CCCCTTCATT GACCTCAACT
  ACATGGTCCA CATGTTCCAA TATGACTCCA CCCACGATGG CACAGTCAAG GCCGAGAATG
  GGAAGCTTGT CATCAACAGG AAGCCCATCA CCATCTTCTA GAAGCAAGAT CCCGCTAATG
  GGCCGTGATG GCCGAAGGGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51793973	NES14546239	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37425314					SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51793973	NES14546239	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:19542125 () rs orientation: forward

Symbol	Name	Function Class
Gm17799	predicted gene, 17799	within coordinates
Rr512780	regulatory region 512780	953 bp proximal