rs37426501 SNP Detail

Summary

• ID
  rs37426501
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:61328897 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATTCAGGGT TCTACTTCTC
  TGCAAACAAC CAGGAAATAT TTTACACTCT AATGTTCAAA GTGAGCAAGA TAACTTTTAT
  AAATATGTTC AAAGCATCAA AAAGGAAATG AAAATGGCTT GTTTTTTGAT GCTGGTGGTA
  AATTAGGCTT TGGTTCTAAA TTTGATTCCT TCAAATATCA GCAATCAAAA TCAGTTTTAA
  Y
  GTTCGATTTA GGAAGAGATC AACCCTAAGA GAAAGGCAGC AGCAGACTCC AGCGCAATCG
  CATTTTAAAA TGGCTACTGA AAAGTAGGCT CCTGTTCGCT TCTGTGGGAC AAACACAAAT
  CAGAAGAGAA CTCGAAGATT AGCTAACGCG TATGTAAAGC TCCTGAACCA GTTAGGTCCA
  CACTGTGACC TTACAGTCAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50413748	NES13453119	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	C	T	C	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37426501					SNP	T	T	T	T	T	C	T	C	C	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50413748	NES13453119	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:61328897 () rs orientation: forward

Symbol	Name	Function Class
Rr354846	regulatory region 354846	1698 bp distal
Rr356345	regulatory region 356345	815 bp distal
Slc26a2	solute carrier family 26 (sulfate transporter), member 2	1029 bp downstream
Tssr153542	transcription start site region 153542	373 bp downstream
Tssr153543	transcription start site region 153543	539 bp downstream
Tssr153544	transcription start site region 153544	721 bp downstream
Tssr153545	transcription start site region 153545	1880 bp downstream