rs37427770 SNP Detail

Summary

• ID
  rs37427770
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:134582711 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CGCAG GAATGTCAGG TGGGCAGAAC
  R
  CAGCAGCCTT AATAGAGTGA GAAGT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss51441313	NES14012830	PERLEGEN	MM_PANEL2	f	SNP	A		G	G	G	A	G	G	G	G	G		G	G	G	A		G
ss133782473	ENSMUSSNP895837	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G						G
ss321980821	CHEV_6_134555766	CHEVERUD	SCREENING_POP	f	SNP												G					A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs37427770					SNP	A	A	G	G	G	A	G	G	G	G	G	G	G	G	G	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51441313	NES14012830	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:134582711 () rs orientation: forward

Symbol	Name	Function Class
Gm38910	predicted gene, 38910	within coordinates
Rr133397	regulatory region 133397	1511 bp distal
Rr133398	regulatory region 133398	1490 bp proximal
Rr147832	regulatory region 147832	1912 bp distal
Rr147833	regulatory region 147833	291 bp proximal
Tssr59244	transcription start site region 59244	22 bp upstream