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rs37432072 SNP Detail
Summary
  • ID
    rs37432072
  • Variation Type
    SNP
  • Alleles
    C/T
Genome Location and Flanking Sequence
  • Location
    Chr15:75717500 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                ATCTGACCTC CAGGTACATA
    CCATAGCATA GGTATGCAAC CAAACACACA AATAAATAAA TATGTTTCTA TATGTGAGTA
    AAATGTCCAC TGCGTCAAGA ATTCATATGA ATTGTGCTTC TAATGAAGAA CCTGCTCACA
    CAGACAAGGA TATAACCCAT GGCCTGAGCC CCACCTATTG AAGCTCCCAT GGCACGTACA
    Y
    GCAATAACAG GGACTTTGAG GACCTCAGCA ATCATGATAG AAATTGCAGG TAGCTGCACA
    GTGGTGGCAC ATGCCTTTGG TCCTAGCACT CGGGAGGCAG AGGCAGGTGG ATCTCATGAG
    TTCCAGACTT GCCTGCTCTA CAGAATGAGT TCCAGGACAA CAACAGAGAA ACCCTGTCTT
    GAAAAACAAA CAAACAGCAG                                            
    
    Y = C/T
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129S1/SvImJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3/J
C3H/HeJ
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
WSB/EiJ
ss51719853 NES14560165 PERLEGEN MM_PANEL2 f SNP C C C C C C T C C C T T C C T
SNP Consensus Information
SNP Consensus Type
129S1/SvImJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3/J
C3H/HeJ
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
WSB/EiJ
rs37432072 SNP C C C C C C T C C C T T C C T
Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation
Type
Alleles
ss51719853 NES14560165 PERLEGEN MM_PANEL f SNP C/T
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr15:75717500 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Gm34851 predicted gene, 34851 481 bp downstream
Gm53897 predicted gene, 53897 315 bp upstream
Rr390927 regulatory region 390927 within coordinates
Rr504553 regulatory region 504553 738 bp distal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory