rs37435289 SNP Detail

Summary

• ID
  rs37435289
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:84044324 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCGCAGAATG TCAGATCTTT
  ACAGATACAC ACTGACAAAT AAAACTTCAA AACGTTTACA GTCGTGATCT TAGAACAGAA
  GAATTACAAC ATTTTTTTCT CCTTAGCTCA GTGATGAGAG CTGCTATTCT ACCTGTCTCT
  CCTGAAAACC TCTGAAACTG AGCAAAACTA ACTTCTCCTT TGAAGCTGTT CCATCAGGCA
  Y
  TCTGTCATAG CAATGCAAAG TCTGACCAGC AGGTAAGTGT AATTAAAAAA TAAGGATCTC
  CAGATGAAAT CACCTTGGGT GCAGAATCAG CCCTATGGTT AATGACTGTC ACAGAGAAAG
  GGAACAGACA ACAAAGACAG GAAGAAGGAC ACTGGCAGAT GGCACCAAGA GTAGGAATCA
  GGCACACACT GCTGGCAGCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	KK/HlJ	NOD/ShiLtJ	WSB/EiJ
ss51568496	NES14672446	PERLEGEN	MM_PANEL2	f	SNP	T	T	C	T	T	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	KK/HlJ	NOD/ShiLtJ	WSB/EiJ
rs37435289					SNP	T	T	C	T	T	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51568496	NES14672446	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:84044324 () rs orientation: forward

Symbol	Name	Function Class
Mnd1	meiotic nuclear divisions 1	Intron
Rr578991	regulatory region 578991	981 bp distal
Rr578992	regulatory region 578992	211 bp distal
Rr578993	regulatory region 578993	1538 bp proximal