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rs37437232 SNP Detail
Summary
  • ID
    rs37437232
  • Variation Type
    SNP
  • Alleles
    C/T
Genome Location and Flanking Sequence
  • Location
    Chr3:97140241 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                TTAGTTTTTG CTCTCGGGCC
    CTTCCCTTTC ACACAAAGAA CCTCTTCGGC TTCACTGAAG TTGCTGCCCA ACCATTTTCA
    GCATTACACT TTCACGCAGG GCAGGTCGCA GTCTTTATCC AGGCAGCTTC CCTTAACCTC
    TTGACCACCC ACCCACCCGG CAGTGGGAGT CCCTGCTGCC TGGGTGTAAC TGGACTTTGT
    Y
    TGGACTGCAC TAGAATCATC TTAAGCTGGA AAATGGACCC GCAGCAGAAC TCAGAAAATG
    AAACATAAGC TTCTTCGCTT CTTGCCTCCT GATCCTTGCT GTCTGTGTCA TTTCCCATAG
    CAACTGTCCC AAGTGTGATC CCTACTGTTC TACATTGTGA GGTCTGTCTT TCTTGCTTCA
    TCCCACCTTG GGAGAACCAG                                            
    
    Y = C/T
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129S1/SvImJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3/J
C3H/HeJ
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
WSB/EiJ
ss51578540 NES14672289 PERLEGEN MM_PANEL2 f SNP C C C C C C T C C T T C C T C
SNP Consensus Information
SNP Consensus Type
129S1/SvImJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3/J
C3H/HeJ
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
WSB/EiJ
rs37437232 SNP C C C C C C T C C T T C C T C
Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation
Type
Alleles
ss51578540 NES14672289 PERLEGEN MM_PANEL f SNP C/T
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr3:97140241 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Bcl9 B cell CLL/lymphoma 9 Intron
mRNA-UTR
Noncoding-Transcript-Variant
Rr581471 regulatory region 581471 1723 bp distal
Rr581472 regulatory region 581472 237 bp distal
Rr581473 regulatory region 581473 1898 bp proximal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory