rs37445077 SNP Detail

Summary

• ID
  rs37445077
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:67062167 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGACTGTGCT GGAGTGTGGT
  GTGGTTGATC GGCCCAGTGA CACTTCTAGC TTTGCAGGAA ACTGATCATT CTTCTCCCCA
  TCAGGTGTCA ACTGCGAATA GCTTCTTGGT TAGGGGCGGG ACTAAGTCCA CTCGGGTCCT
  GAGACCCGAC CATCACCACC ATCACCACCA GGCCTAATGC TTTCACGCTG CTGTCCTCCT
  M
  TGCTCAGAGC CACAATTTTT CTCTCTCCAA ACAGATAAAT TTTAATTACA AAAAAAAAAA
  AGAAAAGAAA AAAAGTGGGG GGTGGGGGCG GGGAGGGAGG GAGGGAGGGA GGGAGAGAGA
  GAGAGAGAGA GAGAGAGAGA GAGAATGAAT GAATGAGAAT GCATATGAAT ATAAGGTTGT
  GCACAGGTAG GGAGATAAGG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50729630	NES14251445	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	A	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37445077					SNP	C	C	C	C	C	A	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50729630	NES14251445	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:67062167 () rs orientation: forward

Symbol	Name	Function Class
D9Dcr5	DNA segment, Chr 9, Derry C. Roopenian 5	680 bp proximal
D9Mit302	DNA Segment, Chr 9, Massachusetts Institute of Technology 302	677 bp proximal
D9Mit302.1	DNA segment, Chr 9, Massachusetts Institute of Technology 302.1	456 bp proximal
Gm19299	predicted gene, 19299	within coordinates
Gm40529	predicted gene, 40529	1500 bp downstream
Gm68695	predicted gene, 68695	within coordinates
Rr681887	regulatory region 681887	1195 bp distal
Rr681888	regulatory region 681888	760 bp distal
Rr681889	regulatory region 681889	1728 bp proximal
Tssr90326	transcription start site region 90326	334 bp downstream
Tssr90327	transcription start site region 90327	361 bp downstream