rs37446115 SNP Detail

Summary

• ID
  rs37446115
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  126
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:135285798 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACCAGAAGGC TGGGTCCTAC ATGGTTAGAA GGAGGGTCTC
  ATTGTCTACC TCCATAGTGA CATACTTCCT CCAACAAGGC CATACCTACT CCAATAAGGC
  M
  ATACCTCCTA ATAGTGCCAC TCCCTGGGGC AAGCGTTTTC AAACCACCAC ACGCTGACTC
  AAAAACCAAA GAAAAACAAG AGAAACCCCC ACAAAACCAA                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ
ss51444387	NES14008579	PERLEGEN	MM_PANEL2	f	SNP	C	A	A	A	A	A	C	C	C	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ
rs37446115					SNP	C	A	A	A	A	A	C	C	C	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51444387	NES14008579	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:135285798 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18093	CpG island 18093	1131 bp proximal
Gm36640	predicted gene, 36640	within coordinates
Pbp2	phosphatidylethanolamine binding protein 2	329 bp downstream
Tssr63760	transcription start site region 63760	1549 bp downstream
Tssr63761	transcription start site region 63761	1574 bp downstream