rs37451821 SNP Detail

Summary

• ID
  rs37451821
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:91908062 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T GTATTTCATG GCTTCCATCC CTACATGAGA CTTTATTACG
  ATCACATAGG AATAAAAAGC CATAAAGCAC TAGAGTGAAT TTATCTTGGT CGGATGTAAA
  M
  CTTATTTTCT TCACACGACT TCAAAACCAT TTCCAAGCTA ACCAATCATT TCATGCTACA
  TTAAGGAACA TTTTAGGCTA CATGTAAGGG ACACAAAGCA C                    
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50893790	NES14220686	PERLEGEN	MM_PANEL2	f	SNP	A		A	A	A	A	A	A	A	A	A	C		A	A	A	A
ss147299171	ENSMUSSNP2561392	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A						A				C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37451821					SNP	A	A	A	A	A	A	A	A	A	A	A	C	C	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50893790	NES14220686	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:91908062 () rs orientation: forward

Symbol	Name	Function Class
Gm55043	predicted gene, 55043	385 bp upstream
Mir135a-2	microRNA 135a-2	15 bp upstream
Tssr98922	transcription start site region 98922	96 bp upstream
Tssr98923	transcription start site region 98923	1190 bp downstream