rs37452647 SNP Detail

Summary

• ID
  rs37452647
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:126166788 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAGAAGGAG GAGGGGGAGG
  AGGAGAAGAA GGAGGAGGAG GAGGAGGGGG AGGAGGAGAA GGAGGAGGAG GAGGGGGAGG
  AGGAGGAGGA GAAGGAGAAG AAAGAAAGAA GAAAGAAGAA AGAAGAAAGA AGAAAGAAGA
  AAGAAGAAAG AAGAAAGAAG AAAGAAGAAG CTGTCTAATG ACAGCCATGT TCTTTGGTCA
  R
  GTCCACAGAT ATTGCCAGAC AGCACAGTCA ATTATACAAA GACCCAGATT TAGGTGAGGC
  AACTTATGCT TACTGACTTT GTGTCAGACC CATCCTTTAT TACCCCAGGA CCACATTGGC
  AGCAGAGGGG CCTGATGGAA GGCTAATGTC TGCTCCTTTT ACTGAGTGAG CACCAACGGT
  CTCTTCTGCA CTCTTTCTGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
ss51820887	NES14712597	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
rs37452647					SNP	G	G	G	G	G	G	A	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51820887	NES14712597	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:126166788 () rs orientation: forward

Symbol	Name	Function Class
D5Mit214	DNA segment, Chr 5, Massachusetts Institute of Technology 214	452 bp proximal
Rr116253	regulatory region 116253	588 bp distal