rs37453037 SNP Detail

Summary

• ID
  rs37453037
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:69274473 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTATACGGA TCTCAGCAGG
  TACTTAAACG GAAAGTGTAT TATAAAATGT AAATTGTAAT ATGAGATTTC TTGGATATGT
  TCATTTTTAA AGACTGAAAA GACACACTAC AGCCAGGAAA ACCTCCTTTG GGGGCAAATT
  GTAAACTAGG AAATCTAAAA AAGCCAAACT AAAAACACGT TTAAAATCTA TCCAAATTTT
  W
  CTTCTCCAGG CAATAATGAA AATTCCACAC AGAGACGGGT TTGGAAGACT CATACTCTAC
  AATATAAATC GCCAACAGAC ACGCATATGG ATTCACCCAT GTCTCTCCTT CTCTGACACG
  TCTCTCTGTA ACTTCCAGAA GTAACACTGT AATGATTCCC ATTCTGCAGA GGCGGGGACC
  TCCGTTGATC AGAAGCCAGC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51013775	NES14402719	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	T	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37453037					SNP	A	A	A	A	A	A	T	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51013775	NES14402719	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:69274473 () rs orientation: forward

Symbol	Name	Function Class
Cpgi4690	CpG island 4690	76 bp proximal
Gm47545	predicted gene, 47545	220 bp upstream
Pole2	polymerase (DNA directed), epsilon 2 (p59 subunit)	within coordinates
Rr403319	regulatory region 403319	315 bp upstream
Rr467012	regulatory region 467012	within coordinates
Rr467013	regulatory region 467013	470 bp proximal
Rr467014	regulatory region 467014	492 bp proximal
Rr467015	regulatory region 467015	1622 bp proximal
Rr467016	regulatory region 467016	1714 bp proximal
Tssr113624	transcription start site region 113624	933 bp upstream
Tssr116494	transcription start site region 116494	468 bp downstream