rs37457539 SNP Detail

Summary

• ID
  rs37457539
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:129124954 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATTCTTCTC CAGTAAACTG
  CACGAAATAA CAATTGACAC TTAATGTAAT TGTCATTGCA AATGAAATTG TCATCCCTTG
  TGAAATCACT GTGATATAGC CCCAAAACAC CAGTAGTGAA ATTTATCAAA TACTTATATT
  CATAAACCTC TGAGGCACTT TGTGTGGATG TGTAGAGTCA GATGCAGTTG CGATTTATCC
  S
  GGTGTCATTA ATAAATTCTC TACAACTGGC ATTGTATTTA CAATTATTCA CTATTACTGA
  ATTCTCTACA ACTGGCATTG TATTTACAAC TTCGAGTTGG TGATACATTT TCAAATTACA
  AGAAGGCAAA ACATCTTACT TCTCAGATGA ACAAGCAGAA TTGAAAGCAA GGGCAGATAG
  GGATCAGACC CACAAAACAC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51623315	NES14656004	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	G	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37457539					SNP	C	C	C	C	C	C	G	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51623315	NES14656004	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:129124954 () rs orientation: forward

Symbol	Name	Function Class
Enpep	glutamyl aminopeptidase	Intron
Rr584992	regulatory region 584992	1405 bp proximal
Tssr1044	transcription start site region 1044	968 bp downstream
Tssr1045	transcription start site region 1045	1219 bp downstream
Tssr35615	transcription start site region 35615	1408 bp downstream