rs37463498 SNP Detail

Summary

• ID
  rs37463498
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:109681612 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTTCTCATC ACCCACCTAC
  CTCTTGGAAC CAGAATCCGA GGCTCATTCC TGAACACCCC CAATGTACTG TACTTGTTGA
  AGTTGAGAGC TACTATTCCC CTGTTATCTC CTGAGGCACA ATTTCTGGGG TCCCTGGTTC
  CCTTCAGTGA CCCCCCCTAA ACCTGGAGAG ATAAGGAATG CAGGTGGTCT GTGTTGTTGG
  K
  AAATAGTCTC AGGCAATTCT GTGGACTGTC AAATTGCACA GGGGTTTTGG TTGCTCTCCA
  GGGCCCACAG AAGCAGACAC TTCTGACAAG GCACCTGGCA CTTTCCAGCT GCCTTTGTTT
  GCTTTCTGAC CAGTGCTAAT TGATACTTGA AGGAGAGGTT GTCCGTGTTG TCTTCTCTTT
  ATTTATGATG AAACATACAC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	NOD/ShiLtJ	WSB/EiJ
ss51053009	NES14374685	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	G	T	G	T	G	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	NOD/ShiLtJ	WSB/EiJ
rs37463498					SNP	T	T	T	G	T	G	T	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51053009	NES14374685	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:109681612 () rs orientation: forward

Symbol	Name	Function Class
B830012L14Rik	RIKEN cDNA B830012L14 gene	623 bp downstream
Gm60279	predicted gene, 60279	1140 bp upstream
Mir329	microRNA 329	1601 bp downstream
Mir494	microRNA 494	140 bp upstream
Mir666	microRNA 666	1907 bp upstream
Mir679	microRNA 679	399 bp upstream
Mir1193	microRNA 1193	493 bp upstream
Mirc6	microRNA cluster 6, including Mir379 through Mir544	within coordinates
Mirc36	microRNA cluster 36, including Mir379 through Mir3072	within coordinates
Mirc45	microRNA cluster 45, including Mir666 through Mir543	1907 bp proximal