rs37471737 SNP Detail

Summary

• ID
  rs37471737
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:68313671 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAATGGGGGA AAGGAACATA
  CAGAAAGGTG GGCTTGTGTG TTACTATGTG CTGTGATCTC CTTACAGTGG ACGGTTAACA
  CAGGTTCAAG CAACGCAGCA GCCATCAAAT CAGTTCAAGG GGTGATACTG AAATCCCTTG
  ACAGCACACT TAGCTCTTCC TCACTCTGGC AGCTGCTGGA GAAAGTTAAG ACTATATATT
  W
  GATACCCGGT GAGTTTGAGT CTATTTTTTG AACACAGATC TCCTAATCCT GAATGCATAG
  ACCCCAGGAA GAAAGGAGAA AGGAAACAGC AGTGAGGGCT TTGGTTGAAT CCAGTCTCTG
  CTTATCTCCA CCACGCAAGC AGCCTCACCA GGGAGTAGGG CGGCTGCATC TGAAAGGATG
  CTCTAGCTGA TGGCAGCTGT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50975084	NES13920822	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	T	A	A	A	T	A	A	T	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37471737					SNP	A	A	A	A	A	A	T	A	A	A	T	A	A	T	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50975084	NES13920822	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:68313671 () rs orientation: forward

Symbol	Name	Function Class
Gm10723	predicted gene 10723	1445 bp upstream
Iqschfp	Iqcj and Schip1 fusion protein	within coordinates
Rr577995	regulatory region 577995	250 bp distal
Schip1	schwannomin interacting protein 1	within coordinates