rs37472985 SNP Detail

Summary

• ID
  rs37472985
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:83016352 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTATATTAG AATCATTCTA
  TAAGCTGATA TCTGCAAAAA GAAAAGATCG TTATCCTCGA ATGCATGGAA ATAATGAGTG
  CAGAGGTTAA GATTAAATGC CTTTCTTCAA ACTTAGTAGC AGAAGTCTGG CTGACCTTAA
  TACTCCTGAC AATTAATCTT GAACAGGATG CTGGGAGCAC CCACCAGGGG CAGCTGCCCT
  Y
  CTCTCCTCAG CCTGTTTCAC CTTCTTAGCT TTTGGATGTG GTGTCCTTTG CACCGTTGTG
  GCTAGTTGAG GGGAACGCCC TTCATTCTAT CTGTACACAG ACTGTTTAAA GATGGCAACT
  TGGGTCAAGT CTTCAGAGTT CACTAGATCC ACCAGGAAGA CCTGGTTCAT CTGCTCCATC
  CCTGAAATTA TGGCCAAATA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	CAST/EiJ	DBA/2J	PWD/PhJ
ss50989466	NES13924207	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	A/J	CAST/EiJ	DBA/2J	PWD/PhJ
rs37472985					SNP	C	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50989466	NES13924207	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:83016352 () rs orientation: forward

Symbol	Name	Function Class
Rr578836	regulatory region 578836	1201 bp proximal
Rr578837	regulatory region 578837	1315 bp proximal