rs37473629 SNP Detail

Summary

• ID
  rs37473629
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:45513227 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGACTAGCA TAGCTGGCTG
  TAGAGGGAGA GAAGATGGAC TGATGGGTCT CTTGCCAAGG TTAGGAGATT ACCAAACCCT
  TTCACTGAGA AAATGGGACC CAAGCAAGAC TTTAATGCAA AGAATGAGTT GGTTTTGTTG
  TTAAGTCAAG ATGCTGAGTG TCACCAATGA TCACGGCAGT GAGAGACTCA GTCCCTGGCA
  Y
  CAGGGAGCCA AGTCCAGTAA AGAGACACAC CTTTATCTGT TGACCACATA GTTCATCATA
  CAGATACTCT TGTGACATGA ATGGGGTGGT CACTAGATTC TCAGGACTTG GCCAAAAGCC
  TGGTGCTGTA AGCTGAGAGA CAGCCTTTCT TCCCATGGGC CAGGGTCCTC AGGATAAACA
  GCGTGTGTGT GTGTGTGTGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss52012060	NES15026851	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs37473629					SNP	C	C	C	C	C	C	T	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52012060	NES15026851	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:45513227 () rs orientation: forward

Symbol	Name	Function Class
Dscaml1	DS cell adhesion molecule like 1	within coordinates
Rr195123	regulatory region 195123	227 bp distal
Rr200399	regulatory region 200399	627 bp distal