rs37474884 SNP Detail

Summary

• ID
  rs37474884
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:34608734 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGCTAGCTAG GAAGCAGAGA GAGAGAGAGA GAGAGAGAGA
  GAGAGAGAGA GAGAGAGAGA GAGGAAGAAG TTGTGTTCCC ATCTCTTCCC AGGGTACGTG
  Y
  CCTAACCTTC TCTCCAGTAG ACCCCACCTC ATGCAAGTTT ATCACATTCT GACAATGCAC
  AGATTTGGGT CTGTGTTCTT AAGGCTTTCA TGTGCACTT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NZW/LacJ	WSB/EiJ
ss51236989	NES14283307	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	C		T	T	T	T
ss148891511	ENSMUSSNP4804534	ENSEMBL	ENSEMBL_Sanger	f	SNP		T					C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NZW/LacJ	WSB/EiJ
rs37474884					SNP	T	T	T	T	T	C	C	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51236989	NES14283307	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:34608734 () rs orientation: forward

Symbol	Name	Function Class
Gm19225	predicted gene, 19225	1564 bp upstream