rs37477055 SNP Detail

Summary

• ID
  rs37477055
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:129052891 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGACACCGT GGGAACTAGG
  AATTAACTCA TTACTAATAC CTGTGGAACA GAAAAATAAA TAAAAAGAAA AGAAAAAAGA
  AAGGATTTTT TCCCAAGAAA CTTTTCTAGA GACTCATAGA ATTTCTACAA TAGTGTAGAA
  AACTTGAAAG AAAAAAACAA CAACAATTTA CTGTCTCTAA AAAGCTAGTT GTTGAGTTTT
  Y
  TTCGTGGATA GCTGCTACAC CCTTGCACTA AGACTTTATC ATTTCTCTGT CTTGTTACTG
  TCAGGTTTAT AAAAGACTGG AAGCTGACCA AACAAATGGT GTCATTTAGA TATGAAGGCT
  TTCCCCCAAA GGCCCAAGTG TAAATGCTCA ACAGCCAGAT GGTAAATTCT GGGGATTCCT
  GAGGGCTTGA TCTTCACCAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss51624461	NES14657202	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs37477055					SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51624461	NES14657202	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:129052891 () rs orientation: forward

Symbol	Name	Function Class
Gm65501	predicted gene, 65501	within coordinates
Rr584980	regulatory region 584980	555 bp distal
Rr584981	regulatory region 584981	495 bp distal