rs37482119 SNP Detail

Summary

• ID
  rs37482119
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:122362470 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTGGTGGGC AATGGCACTG
  CTGCTAAACC TAATGCACTG AGAATCATGG GACCAAGATG TGACGCTTCA TGGGGCTTAG
  GGCTAAGTCC GTCTGTGCGT TTTTCATTAA ACATGAAAAC ACTGTTACTC ACATTATCCA
  TCTGTTTCCA ACACATGTCA AGGTATTGTT GAGCTTTTCG TCCTTCTTGG AGATGCTGAA
  K
  ATTATAACCA TCAGCAAACA AACAGAACAA ACAAACAAAA ATAATTACAT TTATATACAA
  AGGGAATTCC ACCATCCTCA AAAGGCTCTT AACTTTTATT AAGGTGATAA AATATAGACA
  TGTATATATA GTTATGCATC TTTAGAGTTA CAAAGAAAGT AAAAAAATTT ATTTAAAATA
  CATCTTATAG GTTACTTTAA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51614384	NES14662964	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	T	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37482119					SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51614384	NES14662964	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:122362470 () rs orientation: forward

Symbol	Name	Function Class
Fnbp1l	formin binding protein 1-like	within coordinates
Gm43569	predicted gene 43569	within coordinates
Tssr35455	transcription start site region 35455	13 bp upstream
Tssr35456	transcription start site region 35456	889 bp downstream