rs37487200 SNP Detail

Summary

• ID
  rs37487200
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  126
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:140701250 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTCCTTATTT CTCCAGCTAC AGATCTTGGC ACCTTTCAAG
  GGCCAAAGTG CATTGAGAGG CATCTGTTGC TAACTGAGAC CCAGTGACCT CACTGTGGAT
  S
  GGATGGACAA GACCAACGAG GGCTCTAGGG GGCAGTGAAA CTCCAAAGGC TAGGTGCCCT
  TGCCCTAGGA CCTCCAGCCC TTCAGGAATG TGTCAATCAT                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss50482357	NES14107156	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	C	G	G	G	C	G	C	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs37487200					SNP	G	G	G	G	G	G	C	G	G	G	C	G	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50482357	NES14107156	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:140701250 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19919	CpG island 19919	1616 bp proximal
Gm33560	predicted gene, 33560	1894 bp upstream
Gm73077	predicted gene, 73077	814 bp downstream
Rr400707	regulatory region 400707	1693 bp upstream
Rr657849	regulatory region 657849	within coordinates
Rr657850	regulatory region 657850	18 bp proximal
Rr657851	regulatory region 657851	1493 bp proximal
Rr657852	regulatory region 657852	1653 bp proximal