rs37488197 SNP Detail

Summary

• ID
  rs37488197
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:28092775 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCAATATTAA TCTCTGGCTC
  AGTGCACATG CGCACAGACA TATACCACAC ACACACACAG AGACAGACAG ACAGACAGAC
  AGACAGACAG ACAGACAAAC AGATTTTTTT CACTGAAGAA GAACTGTACC CAGACTTTCA
  ATGAGAAGCA GGAAGAGCCT GTGATCTTGT ACACTTGGAA CCCAAAGCTC CTTCTCACCT
  Y
  GATGATTTAT AAGTCACCCA GTCACTTCCT TTCAGCCACC AGATGATAGT ATTTCTGTGA
  GCAGAGAGAT CACTTTATTG TTCTTAGATT TTGCCTCTAG ACATGGAAAT CGTTTAATTA
  AACATGAGGG AATGGAAGGA GGTGCGAAGA TCAGACTGGG AAGTCATGAA TCTTGTATTG
  TACCTGAGAT TATATCTTAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss51805149	NES14533719	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs37488197					SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51805149	NES14533719	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:28092775 () rs orientation: forward

Symbol	Name	Function Class
Fgf12	fibroblast growth factor 12	within coordinates
Tssr140647	transcription start site region 140647	285 bp downstream