rs37494438 SNP Detail

Summary

• ID
  rs37494438
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:18301984 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAATG GAAAACAGTC TCCTAGGCAA
  R
  GTCATAACTC AGGGAAACAA TTGTC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss51882337	NES14899004	PERLEGEN	MM_PANEL2	f	SNP	G		A	A	A	G	G	G		A		A	G	G		A
ss148452322	ENSMUSSNP6301450	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A						G
ss322115432	CHEV_7_19153408	CHEVERUD	SCREENING_POP	f	SNP											A				G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs37494438					SNP	G	A	A	A	A	G	G	G	G	A	A	A	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51882337	NES14899004	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:18301984 () rs orientation: forward

Symbol	Name	Function Class
Psg27	pregnancy-specific beta-1-glycoprotein 27	754 bp upstream
Tssr2095	transcription start site region 2095	498 bp upstream
Tssr70834	transcription start site region 70834	862 bp upstream
Tssr70835	transcription start site region 70835	761 bp upstream
Tssr70836	transcription start site region 70836	714 bp upstream
Tssr70837	transcription start site region 70837	664 bp upstream
Tssr70838	transcription start site region 70838	536 bp upstream