rs37495409 SNP Detail

Summary

• ID
  rs37495409
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:34922848 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAGAAAGCA GGAAGCCGCA
  AAGCAGCTGT GGCAAGGCTT CGGAGGTTTC ACAGCAGCTC TGATGCGGGG GACCAGTTTC
  TCAGGGCAGG CCTGCGCAGC AGGGCGTCAG TCTTCAGCCA CGCCCTTAGG ATGGTCAATC
  ATTGGCAGGA GCAGTGCAAT AGGAACGAGC GTGGGCGACC CCGTGTCACT GTTTCAGTTT
  R
  TCCTGTTCAG TTGGTTGAGT GAGCGACAGA GAGCAAACAA TAAAGTGGAA GGCAGAGTCA
  CCCTCAAGAA GACGATTATG TTCTTTTTCT ATCCCAAAAA CCTGATTGTG ACATGTCATT
  GTGAAATAAA CGTTTTGTTC TTTAAAAATA AGGAAACATT GTTAATTTTA TTATATATAT
  ATAATATATG CTTATGAAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50525761	NES14089094	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37495409					SNP	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50525761	NES14089094	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:34922848 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20247	CpG island 20247	within coordinates
Gm39159	predicted gene, 39159	within coordinates
Gm45349	predicted gene 45349	within coordinates
Gm46038	predicted gene, 46038	1224 bp upstream
Rr400818	regulatory region 400818	65 bp downstream
Rr662016	regulatory region 662016	within coordinates