rs37497265 SNP Detail

Summary

• ID
  rs37497265
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:4840614 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCTGGCCGC TTGCCAGAGT
  TTGTCTAAGC AGAAGGCAAC GTTTCATTCT CAGTAGCTAC TCCATGCAGG TAGCCACAAG
  CCCACCAACA AACGAGAGGA AAAGGAGACA GCCCACTCAA GAGCCCAGAA ATTTGTGACA
  GTCAAGTTCT ACAAAACTAG CACAGTGAGA TTCCGACCCT GCCCAGAAAG GCTCAGAGTG
  Y
  AACAGCTTGT CTCAGCAGTT GGCTCACAGG CCATGGCAAG GGAGGTTGGG GGCGAGGACA
  ATGACACAAA TGTACAAATG ACAAGCAGTG AGGAACCGCC ATTAGAATCA CTTATGTCCT
  TGAACATTCT AACCAGTGTG ACACTAGAAC TAAGGTCTCC ACCACTGCCA TGGGTCATAG
  CTCACTGGAC AGGCTGGGCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C3H/HeJ	CAST/EiJ	DBA/2J	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss50908932	NES13484798	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	A/J	C3H/HeJ	CAST/EiJ	DBA/2J	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs37497265					SNP	T	T	T	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50908932	NES13484798	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:4840614 () rs orientation: forward

Symbol	Name	Function Class
Gm6123	predicted gene 6123	740 bp upstream
Rr407421	regulatory region 407421	1721 bp distal
Rr407422	regulatory region 407422	1828 bp distal
Rr407423	regulatory region 407423	61 bp distal
Rr407424	regulatory region 407424	315 bp distal
Tssr5799	transcription start site region 5799	703 bp upstream