rs37497571 SNP Detail

Summary

• ID
  rs37497571
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:86972043 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCCAAAAGC TAATATCCTC
  GTGGGTTGGG ACATTCTGGT GGTATTTCTT TTTTGAGCCC ATAAAGAAAT ATATTTTGTC
  CCCACCCCCA CCCCACCCAC CCTTTCTCTG GATTCTTCTT GCTTAGTTAC ATATGCCTTT
  TTCCTACCCT CCTGCTAACA TGTGCCCAAT GACATACTTC TAACCTGCTA ATATGTCTTG
  R
  AAGGTAAGCT CTGTTGCATT CTGATAATTG TCTATTTGAT TTTAAAAGCC AGTGCGCCCA
  GAGGCACCTC TACCTACATC AGCACTTGTG CTAGGATCTG GAGTTTGCTA GTAGTTCTGC
  TTAAAGAAGT CAATGGTGGG CTCATTAAAG AGAACTTTGC TAACCTGGGA CACTAAAAAC
  AAAATTGTAG GGCAACTCCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51746647	NES14796008	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37497571					SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51746647	NES14796008	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:86972043 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Aak1	AP2 associated kinase 1			Intron
				mRNA-UTR
				Noncoding-Transcript-Variant
Rr633570	regulatory region 633570			1710 bp proximal