rs37498614 SNP Detail

Summary

• ID
  rs37498614
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  126
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:49595194 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGTATACATT TTAAACTTCG GTGGCTACAA CAAAAGATTG
  TGTCGGGTTA TCATTCTGCT GGCAGCACAA GACTGCATGT CCTATCCCTG GCTGTTAGCA
  R
  CTTAGAGACT TGCCATCCTC ATGGCCAAAC CTTTAAGTAC CTGCTTTTTT CTTCTGCTCA
  CACGAGGGCT GCACTGGCAC TGACTGAAGC TAAGAGTAAC                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss51106139	NES14353455	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	A	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs37498614					SNP	G	G	G	G	G	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51106139	NES14353455	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:49595194 () rs orientation: forward

Symbol	Name	Function Class
Ippk	inositol 1,3,4,5,6-pentakisphosphate 2-kinase	within coordinates
Rr276357	regulatory region 276357	1994 bp distal
Rr276358	regulatory region 276358	1207 bp proximal
Rr279502	regulatory region 279502	1713 bp distal
Rr279503	regulatory region 279503	243 bp distal