rs37508878 SNP Detail

Summary

• ID
  rs37508878
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  126
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:45505611 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCCCTAGCGC TGGGATTGTA GTTGCCTGCC AACATGCCCA
  TTTGTAAAAC ACATGAATTA TAATTGTGTG TGTGTTTGCA CACACACACA TGTAAAGTCA
  K
  GCAGTTTTTT TTTCTTTTTT TGGTTTTCAA GACAGGTTTT CTCTGTAGCC TGGCTGTCCT
  GCAACTCACT TTGTAGACCA GGCTGACCTG GAACTCAGAA                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	CAST/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50533735	NES14088228	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	CAST/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37508878					SNP	G	G	G	G	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50533735	NES14088228	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:45505611 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20295	CpG island 20295	934 bp distal
Fat1	FAT atypical cadherin 1	317 bp downstream
Rr662830	regulatory region 662830	161 bp distal
Tssr77124	transcription start site region 77124	1641 bp downstream
Tssr77125	transcription start site region 77125	1024 bp downstream
Tssr77126	transcription start site region 77126	917 bp downstream