rs37509921 SNP Detail

Summary

• ID
  rs37509921
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:65735004 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTCTTTACT CATCTGTCTA
  GTTTCCACAT CTTGTCTACT GAACCTCCAT CACTTCAGGT GCCCACCCCT TCCTCCCCGA
  CGCAGCTGGC TGGACACCCA CTTTCCTGAG TTCTCTCTGG TTAGAGCTGG CACAAACTGT
  GTCCTCTATC ATCTTGTGAC TGGGCAGGAC CTCGTGTAAA CCATGAGCAA GACCATCTGT
  R
  CCTCTTCTTC AATGAAGCCT TCTCTCCTGG CATCCCCCAC CTCTGCCCCG CTCTGCCAAA
  TACAGCTGAT TCGGAAACTC CACAGCCAGG ATTCTCACCT TCACAATAAT CAGGCCACTC
  AGCAAAGCCT TCTCTTGCTT CTTCTCTGTG TTTGCAACTC AAAATACTCA GCTGTTTCTA
  AGGGTAAAAA TGACAACAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50963778	NES13941982	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	A	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37509921					SNP	G	G	G	G	G	G	G	G	G	G	A	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50963778	NES13941982	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:65735004 () rs orientation: forward

Symbol	Name	Function Class
Gm37359	predicted gene, 37359	1533 bp downstream
Lekr1	leucine, glutamate and lysine rich 1	Intron
Rr577737	regulatory region 577737	429 bp proximal
Rr577738	regulatory region 577738	1669 bp proximal