rs37510342 SNP Detail

Summary

• ID
  rs37510342
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:44837850 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGCTCCACC TCTTCCCACT
  GCCACACTCC ATACAGAGGA CTAGAGAGGC CAGCACTGGC TACATCCTGC TCCTGGAAGC
  AGAAGCTGTA TGTGAACCTG GGAGGGCCAG AGAAAAGTGG GGGCACAGGC AGGACAGAGG
  TGAAGGGGGG CACAGGTGTG GGGCTGGGAC AAGACAATAG GCGGAAAGAT ATGGAGGAAC
  R
  GAGGAAATTG GTGATGGGAC CAGATTGGTG AGAGATGATG TTAAGGAACA TGGCCTTGGA
  GTTTTCAGGG CTGGGGCTAA GGCAGAGAAA GCTGGAGAAG GGCAGGCGAT GACGAGGTGC
  TGCTCTGGCC AGAGTGAGGG TCTGAACAGG GATACATGGA GAGTTTCCAT GGAAGCAGAG
  CCTACCTGTC GGATAGCTTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss51480578	NES13972248	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	A	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs37510342					SNP	G	G	G	G	G	G	G	G	A	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51480578	NES13972248	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:44837850 () rs orientation: forward

Symbol	Name	Function Class
Gm31097	predicted gene, 31097	472 bp upstream
Kash5	KASH domain containing 5	within coordinates
Rr380751	regulatory region 380751	1417 bp downstream
Tssr72334	transcription start site region 72334	274 bp downstream
Tssr72335	transcription start site region 72335	1128 bp downstream
Tssr72336	transcription start site region 72336	1221 bp downstream
Tssr72337	transcription start site region 72337	1245 bp downstream
Tssr72338	transcription start site region 72338	1368 bp downstream