rs37525602 SNP Detail

Summary

• ID
  rs37525602
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  126
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:52218054 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTCACTCACT CACTCTACCT ACCTACCTAC CTCTATCCCC
  ACTCCCTGTC CCTCTCAAAA TCAACACCAA AACCAGAGCA AGTCATAGTG GCACATTGAC
  M
  AGGAACTTGA CAAAAAACAA AAACAAACAA ACAAGGAATA GTTCTCATAG AACATCACCT
  AACTCCAGGA CAGTGGGTTC TGTATTCTGC TGTTGTGATT                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50950441	NES13932019	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	C	A	A	C	A	A	A	C	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37525602					SNP	A	A	A	A	C	A	A	C	A	A	A	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50950441	NES13932019	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:52218054 () rs orientation: forward

Symbol	Name	Function Class
Gls	glutaminase	within coordinates
Rr33831	regulatory region 33831	1655 bp distal
Tssr6673	transcription start site region 6673	1517 bp downstream