rs37537881 SNP Detail

Summary

• ID
  rs37537881
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:11486343 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATATAAACAT TCCTCCCCCC
  ACCGCATTAT CCCAAAAGAT CCCCTATGAA CCAGCAGCAC ATTCCGACCC ACTAACGTTA
  ACCAAGGCAA CTGTCACCAT GCATTTAGTC GCATCTATGC AAAGCAAAAT ACGTGACAAG
  AACCAAAGCA TCTCTGGATA ATCGGCTGCG CTACACATGC AAAAAAATGC AATGAAGATT
  R
  TATTTTTCAC TTACAGTTAT AGCGCTGTGC ACCGTCACTT AAGGAAAATG ATAAAACTCA
  ACAGTTCTTT CAAAAAATAT ATATATTTAA TTCAGGCTAA CGGCTAAACC GTCTCTGCGA
  GTGGTTCTCT CTCGCTCCTT TTCTAGGAGC TCCGGGCTGC TTAAATCTCT CTTGGATTGC
  GCCCTGCAAG CCCAGCGGCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	FVB/NJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50960693	NES14422074	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	DBA/2J	FVB/NJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37537881					SNP	A	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50960693	NES14422074	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:11486343 () rs orientation: forward

Symbol	Name	Function Class
4930511A02Rik	RIKEN cDNA 4930511A02 gene	1891 bp upstream
Cpgi4418	CpG island 4418	147 bp proximal
Cpgi4419	CpG island 4419	1678 bp proximal
Rr462902	regulatory region 462902	713 bp distal
Rr462903	regulatory region 462903	212 bp distal
Rr462904	regulatory region 462904	261 bp proximal
Rr462905	regulatory region 462905	1371 bp proximal
Rr462906	regulatory region 462906	1872 bp proximal
Tssr3791	transcription start site region 3791	133 bp downstream
Tssr3792	transcription start site region 3792	176 bp downstream
Tssr3793	transcription start site region 3793	369 bp downstream
Tssr112802	transcription start site region 112802	1849 bp upstream
Tssr115745	transcription start site region 115745	689 bp upstream
Tssr115746	transcription start site region 115746	156 bp downstream
Tssr115747	transcription start site region 115747	208 bp downstream
Tssr115748	transcription start site region 115748	265 bp downstream
Vsnl1	visinin-like 1	within coordinates