rs37544073 SNP Detail

Summary

• ID
  rs37544073
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:71058878 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTTAAATT CACTAAAAAA
  TGACAGTGAT GGGGAATTGA GATATGAAAG GAGATTAATG GAAGGGAACA GATGGCCAGA
  GTTAGGACTG TAAGGAGCTT CTTCAAACAC AAGGCAAAGT ACCCACAGCA CACAAAGGGC
  CCACGGAGTG GGGCAGATGT GGGGCGAGGA AAGCTGTGGA GGCAGCCAGA AGACAGAATG
  R
  TCAGAGCAGA CACTGCTGGA GTGGAAAACA AAGAAGCCTT TGTTTGTAAA AGTTGTAGAG
  GAGGCACGCT AGGCTACGAC ACAAGGTTCA GTAGAGATCT CAAGAGCCAG AGAAAGCTAT
  GTAGATTCTT GTCAACATTG TTGCTTTTAA AACCGTTAGT TTTCAAAGTA TTAGCAACTT
  TGAAACGTAT GTGTGAAACA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50734962	NES14244217	PERLEGEN	MM_PANEL2	f	SNP	G		A	A	A	G	A	G	A	A	A	G	A	A	G	G
ss136612565	ENSMUSSNP5629535	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37544073					SNP	G	G	A	A	A	G	A	G	A	A	A	G	A	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50734962	NES14244217	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:71058878 () rs orientation: forward

Symbol	Name	Function Class
Aqp9	aquaporin 9	within coordinates
Gm32714	predicted gene, 32714	within coordinates
Rr682494	regulatory region 682494	1115 bp distal