rs37545010 SNP Detail

Summary

• ID
  rs37545010
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:109682230 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTGACTCTT GGTGTGTGAT
  GGCTTTTCAG CAAGGTCCTC CTCACAGTAG CTATAAGGAC GTGCCAGCAT CGTGACTGAA
  GGGACAATGA TGCCCACTGT TCTCGGGGTA GCTGTGTGGA TGGTAGACCG GTGACGTACA
  CTTCATTTAT GCTGTAGGTC ACCCGTTTTA CTATCCACCA ACACCCAGAC CATCTGTGGG
  M
  AGACACCTTG GTGCACACGG CAGCTATGAA GAAGATGTTG GTGGGGTTGA GGCCAGCGTG
  AAACTAAAAT ATTTCAAGCA GAGTTAGCTT TTAAGGGGGA TCCTTTTTCT GCTTGTGTGT
  GTACATATAT GTGTTCAAGA GAGAGAGTGT GTGTGTGTGT GTGTGTGTGT GTGTTGGGGG
  GGGGCTACCA TGGGCGTGAC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51053007	NES14374688	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	C	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37545010					SNP	A	A	A	A	A	A	C	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51053007	NES14374688	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:109682230 () rs orientation: forward

Symbol	Name	Function Class
B830012L14Rik	RIKEN cDNA B830012L14 gene	1241 bp downstream
Gm60279	predicted gene, 60279	522 bp upstream
Mir494	microRNA 494	394 bp downstream
Mir543	microRNA 543	1462 bp upstream
Mir666	microRNA 666	1289 bp upstream
Mir679	microRNA 679	146 bp downstream
Mir1193	microRNA 1193	5 bp downstream
Mirc6	microRNA cluster 6, including Mir379 through Mir544	within coordinates
Mirc36	microRNA cluster 36, including Mir379 through Mir3072	within coordinates
Mirc45	microRNA cluster 45, including Mir666 through Mir543	1289 bp proximal