rs37545766 SNP Detail

Summary

• ID
  rs37545766
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:91735487 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

             TTGTCATTAC AGGCATGTTC TGGCATGTTC CCTGAAGGAC AGAGCATCTT
  R
  TTATATATTT GGCTTCAAAA TGAGATGGTA GTTCCATTTT CTTTTTTTAA           
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss51366823	NES13739729	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	G	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs37545766					SNP	A	A	A	A	A	A	G	A	A	A	G	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51366823	NES13739729	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:91735487 () rs orientation: forward

Symbol	Name	Function Class
Rr137561	regulatory region 137561	1887 bp distal
Rr141761	regulatory region 141761	87 bp distal
Rr379752	regulatory region 379752	within coordinates
Slc6a6	solute carrier family 6 (neurotransmitter transporter, taurine), member 6	within coordinates
Tssr1939	transcription start site region 1939	1384 bp downstream
Tssr57750	transcription start site region 57750	1986 bp downstream
Tssr57751	transcription start site region 57751	1882 bp downstream
Tssr57752	transcription start site region 57752	1512 bp downstream
Tssr57753	transcription start site region 57753	677 bp downstream
Tssr57754	transcription start site region 57754	581 bp downstream
Tssr57755	transcription start site region 57755	485 bp downstream
Tssr57756	transcription start site region 57756	445 bp downstream
Tssr57757	transcription start site region 57757	420 bp downstream
Tssr57758	transcription start site region 57758	384 bp downstream
Tssr57759	transcription start site region 57759	160 bp downstream
Tssr57760	transcription start site region 57760	104 bp downstream
Tssr57761	transcription start site region 57761	87 bp downstream
Tssr57762	transcription start site region 57762	46 bp downstream
Tssr57763	transcription start site region 57763	22 bp downstream
Tssr57764	transcription start site region 57764	within coordinates
Tssr57765	transcription start site region 57765	22 bp upstream
Tssr57766	transcription start site region 57766	44 bp upstream
Tssr57767	transcription start site region 57767	111 bp upstream
Tssr57768	transcription start site region 57768	134 bp upstream
Tssr57769	transcription start site region 57769	326 bp upstream
Tssr57770	transcription start site region 57770	433 bp upstream
Tssr62095	transcription start site region 62095	154 bp upstream
Tssr62096	transcription start site region 62096	95 bp downstream
Tssr62097	transcription start site region 62097	310 bp downstream