rs37548502 SNP Detail

Summary

• ID
  rs37548502
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:45513382 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGTGTCACC AATGATCACG
  GCAGTGAGAG ACTCAGTCCC TGGCACCAGG GAGCCAAGTC CAGTAAAGAG ACACACCTTT
  ATCTGTTGAC CACATAGTTC ATCATACAGA TACTCTTGTG ACATGAATGG GGTGGTCACT
  AGATTCTCAG GACTTGGCCA AAAGCCTGGT GCTGTAAGCT GAGAGACAGC CTTTCTTCCC
  M
  TGGGCCAGGG TCCTCAGGAT AAACAGCGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG
  TGTGTGTGTG TGTGTGTGTG TGTACGCACG CGTGCGTGAA GATGAACCTT TCAGGACCAA
  TAAAATGTCT CAGAGGGTAA AGGCTGCCTC CTTGAGCAGC TGGCTGCTGG GAGAGAGGCT
  CCTTGCTCCT TGCAGTGAAG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss52012057	NES15026855	PERLEGEN	MM_PANEL2	f	SNP	C	A	A	A	A	A	A	A	A	C	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs37548502					SNP	C	A	A	A	A	A	A	A	A	C	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52012057	NES15026855	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:45513382 () rs orientation: forward

Symbol	Name	Function Class
Dscaml1	DS cell adhesion molecule like 1	within coordinates
Rr195123	regulatory region 195123	382 bp distal
Rr200399	regulatory region 200399	782 bp distal