rs37562571 SNP Detail

Summary

• ID
  rs37562571
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:83018184 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTGGGGTTA TGTAGTGAAG
  AGCATGGCAC GCCAGAGGAG ATTTGATTTT GACGCTCAGT GGGGCTCTTA AGTAGGAAGG
  TGGTAGTGAT GCGGATAACG GAATGGTACT TAGGAAGGAT GAGGAAGTTA GTGCCTTAAA
  GTCTGACACT GTGGGGAGGG AGCATGTTCA AGCTCTCAGA GGCAGCCTGG CTATGATCTC
  M
  GGATGCGGAT CTTTAGCACC AAGACTAAAG AAATGGTAGA GGAATGGAAG AGAGAGCTGC
  ATTTCATTTA AAAGCAGTAA ACATAGAGCT CACTGATTGT TCTGGAGTCA GGAGGGGGAG
  GGGAGGAGGA AGAGGAAGAA GTTGACTAGA AGTAGTCACA TTATTTCAAC TCAGTGGACT
  ATATCAGACA AAGAACTGAT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss50989452	NES13924176	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs37562571					SNP	A	A	A	A	A	A	A	A	A	A	A	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50989452	NES13924176	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:83018184 () rs orientation: forward

Symbol	Name	Function Class
Rr578836	regulatory region 578836	260 bp distal
Rr578837	regulatory region 578837	496 bp distal
Rr578838	regulatory region 578838	1986 bp proximal