rs37585554 SNP Detail

Summary

• ID
  rs37585554
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:41628738 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTCCTCTTT CTCCACATCC
  TTGCCAGCAT CTGCTGTCAC CTGAAATTTT GATCTTAGCC ATTCTGACTG GTGTGAGGTG
  GTATCTCGGG GTTGTTTTGA TTTGCATTTC AACAGGAGCC TATGTTTCAG CATCAAGAAA
  GAAGACTTGC AAGGTAGTAC CTAAGAGATA GATGGTCCTA TAGAAAAAAA AATTATTGGG
  Y
  CATTCAAACA AAGGAAAACA TGCCTCACCA CTCATAAAAT ACATCAGGAT TCAAATGAGA
  TGCTAACATG TTAGACTCTG AGGCTCTGGA CACCAGAAGG CAGGGCAATG ATAAAAACTA
  CTCTATAAAT AAAAGAATGA AAAGAGACTC AATATCCTTA GTCTTTAGAG ACAGGCAAAT
  CAAAGCTACA ATGAGATAGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51623295	NES14837877	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37585554					SNP	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51623295	NES14837877	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:41628738 () rs orientation: forward

Symbol	Name	Function Class
Gm34642	predicted gene, 34642	within coordinates
Trpv5	transient receptor potential cation channel, subfamily V, member 5	369 bp downstream