rs37585903 SNP Detail

Summary

• ID
  rs37585903
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  126
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:113618197 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TATGTCGTAT TTAAGCCATC TTGTGATTTC TGTACACCAG
  TCATGCACGA CAGACAGCCT GCCTCTTCTC TCTTAAAATA TATCCTAGGT ATTTTGCCTT
  R
  ATAATTTTTT TTTAATCCCA GCTTTCTATT GTATAGCTCA AACTGGTGAT CCTCCTGCCT
  CAGCTTCTCC AAAGCTATGA TTATACATAC CTGGCATTGA                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss51840191	NES14765771	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs37585903					SNP	G	G	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51840191	NES14765771	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:113618197 () rs orientation: forward

Symbol	Name	Function Class
Gm43964	predicted gene, 43964	within coordinates
Irak2	interleukin-1 receptor-associated kinase 2	within coordinates
Rr636559	regulatory region 636559	1703 bp distal
Tssr62463	transcription start site region 62463	1859 bp upstream