rs37585988 SNP Detail

Summary

• ID
  rs37585988
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  126
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:114341150 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AATGGTCTGC TTTTCTAGGC TAGCAAGCCA CAGCCATATC
  TCCTAGGGAT GAGATGTCAG ACACACTGAG GTAAACAGAG AAAAGCCCTG TTGCATCGAT
  M
  AAAAAGAAAA GAGCAAACCA CACACAACCT AACCCCACAT AAACACAGTA TTCTCAAGAA
  CACAAATACA CTACAATTAT GAATTTTAAA TCCTATCTTT                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss52042473	NES15055439	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	C	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37585988					SNP	A	A	A	A	A	A	A	A	A	A	C	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52042473	NES15055439	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:114341150 () rs orientation: forward

Symbol	Name	Function Class
Rr198888	regulatory region 198888	1550 bp distal
Rr207540	regulatory region 207540	551 bp distal
Rr207541	regulatory region 207541	851 bp proximal
Rr368881	regulatory region 368881	1921 bp downstream
Trim71	tripartite motif-containing 71	within coordinates
Tssr91842	transcription start site region 91842	357 bp downstream