rs37587297 SNP Detail

Summary

• ID
  rs37587297
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:51108524 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGAA AACCTCTGAA AATATGATTC
  R
  GAATGGTGGC ACACACATGT AATCC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	KK/HlJ	LG/J	MOLF/EiJ	PWD/PhJ	SM/J	WSB/EiJ
ss51512138	NES14632187	PERLEGEN	MM_PANEL2	f	SNP	G			G	A	G	G	G		G	G		G
ss139469942	ENSMUSSNP6808145	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G
ss324619660	CHEV_14_51490742	CHEVERUD	SCREENING_POP	f	SNP									G			G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	KK/HlJ	LG/J	MOLF/EiJ	PWD/PhJ	SM/J	WSB/EiJ
rs37587297					SNP	G	G	G	G	A	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51512138	NES14632187	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:51108524 () rs orientation: forward

Symbol	Name	Function Class
Cpgi6408	CpG island 6408	579 bp distal
Gm26782	predicted gene, 26782	within coordinates
Rr404075	regulatory region 404075	252 bp downstream
Rr491714	regulatory region 491714	694 bp distal
Rr491715	regulatory region 491715	518 bp distal
Rr491716	regulatory region 491716	17 bp distal
Rr491717	regulatory region 491717	414 bp proximal
Tep1	telomerase associated protein 1	507 bp upstream
Tssr125373	transcription start site region 125373	660 bp downstream
Tssr128379	transcription start site region 128379	1712 bp upstream
Tssr128380	transcription start site region 128380	517 bp upstream
Tssr128381	transcription start site region 128381	496 bp upstream