About   Help   FAQ
rs37595859 SNP Detail
Summary
  • ID
    rs37595859
  • Variation Type
    SNP
  • Alleles
    G/T
Genome Location and Flanking Sequence
  • Location
    Chr6:39804822 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                GAGCATGTTT ATTGTGTTTG
    AGATGATACA TCAGTGCTCT CTGAGCTACA AAGGGTAGAA GAAAATCCTC TCATTACAAA
    CTGACAAAGG TAAAACATTT TCACAACAGC ATGAACCACA TACTCAGAAA TATATCTGGG
    CTTAATTCAA ATGACATAAT TCCTAGTCAT ATTTTATAAC TTCATACAGA TAATGAATTA
    K
    GCTAAAATGC ACTATAATAT TTGGTAGACT TCAGGACTAG CTTAGTACAT CACAAAATAC
    ATTTTGATAT CCCAAAGAAG CAAGACTTGC AGGTACACAT TTTAAACATA ACTAACCTAC
    AGCTACAAAG TTCGACTCTT GGTAGCATCT ACCTTTTGGG GGAGTCTCCC AGTCTCCAAA
    GGATAAAGGA AAGAGTAGAA                                            
    
    K = G/T
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129S1/SvImJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3/J
C3H/HeJ
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
WSB/EiJ
ss51614718 NES14840523 PERLEGEN MM_PANEL2 f SNP G G G G G G T G G G G G G G G
SNP Consensus Information
SNP Consensus Type
129S1/SvImJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3/J
C3H/HeJ
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
WSB/EiJ
rs37595859 SNP G G G G G G T G G G G G G G G
Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation
Type
Alleles
ss51614718 NES14840523 PERLEGEN MM_PANEL f SNP G/T
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr6:39804822 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Gm7554 predicted gene 7554 312 bp downstream

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
12/17/2024
MGI 6.24
The Jackson Laboratory